Bone marrow failure

Fanconi anemia (FA)

If you or someone you love has just heard this diagnosis, start here. This guide explains what the condition is, how it is usually treated and where a transplant fits.

Fanconi anemia is a genetic disorder of DNA repair that can affect blood production, growth and several organs, and increases cancer risk. A donor transplant can treat severe marrow failure and some blood cancers, but it does not correct the disorder throughout the body.

Other names and abbreviations

FA, FANC-associated bone marrow failure, inherited chromosomal-instability syndrome, inherited bone marrow failure syndrome, Fanconi anaemia, Fanconi pancytopenia

In short

  • Fanconi anemia is a genetic condition in which cells cannot repair damaged DNA normally. This can affect blood production, growth and several organs.
  • Care includes regular blood and marrow checks, cancer screening, transfusions and infection treatment. Sometimes hormone medicine is used to support blood counts.
  • A transplant from a related or unrelated donor can restore blood production. Cancer checks and care for other organs continue afterward.
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Underlined words open a short explanation. See all terms

Where transplant fits

can restore blood production and treat selected myelodysplastic or leukemic disease. A suitable unrelated donor is an established option. must account for DNA-repair sensitivity, and solid-tumor risk persists afterward.

Treatment depends on the exact diagnosis, disease stage, prior treatment and the person’s health.

Some patients need a donor who is not a relative.

See if you can join

Key facts

Who it affects
Often diagnosed in childhood, but adults may first be identified through marrow failure, cancer or unusual sensitivity to treatment.
How common
About 1 in 100,000 to 160,000 peopleWorldwide estimate (MedlinePlus Genetics, updated March 2025); more common in some groups, including people of Ashkenazi Jewish descent, the Roma population of Spain, the Afrikaner population of South Africa and the Japanese population Source: How common
How it is passed on
Autosomal recessive: a child is affected when both parents pass on a changed gene.
Cells used in a transplant
Donor bone marrow is generally preferred when feasible; graft and conditioning choices require Fanconi-specific expertise.
Where a donor fits
Donor transplant option

The condition

What it is

Cells continually repair damage to their DNA. In Fanconi anemia, part of that repair system does not work normally. are especially vulnerable, which can lead to falling blood counts or abnormal cells.

Some people have differences in growth, skin pigmentation, thumbs, kidneys or other organs. Others have few outward signs. Diagnosis may occur in childhood or adulthood and uses chromosome-breakage testing, genetic testing and clinical assessment.

Where Fanconi anemia (FA) starts in the bloodFaulty DNA repair leaves blood-forming stem cells especially vulnerable, so red cells, platelets and infection-fighting neutrophils can all decline.Simplified illustration.

Marked as affected: blood stem cells, red blood cells, platelets and granulocytes.

  • Blood stem cell, Affected, In the bone marrow
    • Myeloid line
      • Red blood cells, Affected
      • Platelets, Affected
      • Granulocytes, Affected
      • Monocytes
    • Lymphoid line
      • B cells
        • Plasma cells, Develop from B cells
      • T cells
      • NK cells, Natural killer cells

What causes it

Most forms involve disease-causing changes in both copies of a Fanconi-related gene. There are also X-linked and rare dominant forms. A genetic counselor can explain what the identified variant means for the family; the inheritance pattern cannot be inferred from the name alone.

A person carrying one variant associated with recessive Fanconi anemia usually does not have Fanconi anemia. However, some of these genes, including BRCA-related genes, also confer cancer susceptibility in . Family testing therefore needs gene-specific interpretation.

How it can be inheritedIn autosomal recessive inheritance, a child is affected only when they inherit a changed copy of the gene from each parent.Simplified illustration.
Parents
  • Parent: Carrier: one changed copy, not affected
  • Parent: Carrier: one changed copy, not affected
Each child
  • 1 in 4: Affected, Two changed copies
  • 2 in 4: Carrier, One changed copy, like the parents
  • 1 in 4: Neither affected nor a carrier, Two working copies

The chances are the same for each pregnancy.

Usually autosomal recessive. Very rarely it follows an autosomal dominant or X-linked pattern, so what it means for a family depends on the gene involved.

  • Changed copy of the gene
  • Working copy

Symptoms and effects

Declining red cells can cause anemia, low can cause bleeding, and low can increase infection risk. Fanconi anemia also increases the risk of , leukemia and certain solid tumors.

The course varies. The absence of visible physical differences does not rule out marrow or cancer risk, and an abnormal blood count does not by itself establish leukemia. Monitoring is intended to identify changes before complications become severe.

Where Fanconi anemia (FA) can affect the bodyFanconi anemia affects the bone marrow in most people and can also affect growth, skin, bones, kidneys, hormones and hearing.Simplified illustration.

A simple drawing of a body. Often affected: bone marrow. Can also be affected: hearing, hormone glands, kidneys, skin and bones.

Often affected

  • Bone marrow: Marrow failure

Can also be affected

  • Hearing
  • Hormone glands
  • Kidneys
  • Skin: Patches of darker or lighter skin
  • Bones: Thumb or arm differences

This shows the parts of the body the condition can affect. Most people have only some of these, and the drawing says nothing about how severe any of them will be.

Diagnosis and treatment

How Fanconi anemia is diagnosed

Doctors often think of Fanconi anemia when a child's blood counts fall, usually low platelets or white cells first. Large red blood cells and a raised fetal hemoglobin level are common too. About 3 in 4 people have physical differences, such as short height, thumb or arm differences, or patches of darker or lighter skin. Some are found only later, because of a head and neck cancer at a young age or an unexpectedly severe reaction to cancer treatment.

The main test is a chromosome breakage test. A blood sample is treated in the lab with chemicals called DEB (diepoxybutane) or MMC (mitomycin C), and the cells are checked for broken chromosomes. Care guidelines say only experienced, accredited labs should do this test. About 15 to 20% of people with Fanconi anemia have a mix of cells (mosaicism), so a blood test can look normal. If doubt remains, a small skin sample is tested. A gene panel then looks for the exact cause among more than 20 known genes.

The median age at diagnosis is about 7, but people with no obvious physical differences may not be diagnosed until adulthood. After diagnosis, care teams usually do a marrow test with chromosome studies (cytogenetics and FISH). They -type the patient, brothers and sisters, and parents, and every brother and sister is tested for Fanconi anemia. When the family's gene change is known, testing is possible before birth. A newborn can also be tested using .

Chemotherapy or radiation can make a blood breakage test harder to read, so a skin sample may be tested instead.

How it is treated

Care combines blood and marrow monitoring, cancer surveillance and treatment of organ-specific problems. , infection treatment and sometimes androgen therapy can support blood production, but do not repair the underlying genetic defect.

Allogeneic transplantation is considered for significant marrow failure or concerning myelodysplastic or leukemic changes. Conditioning must be adapted because Fanconi cells are unusually sensitive to DNA-damaging treatment. The team balances disease control, and treatment toxicity.

Successful transplantation can restore blood production. Congenital differences, endocrine problems and solid-tumor susceptibility still require care. Cancer surveillance continues after transplant.

How Fanconi anemia (FA) can be treatedCare supports the blood and watches for cancer, and a donor transplant can restore blood production.Simplified illustration.

Kinds of treatment described for Fanconi anemia (FA): supportive care, medicines (for some people) and a donor stem cell transplant.

After diagnosis, the options described here

  • Supportive care

    Transfusions and infection treatment can support blood production, but they do not repair the genetic defect.

  • Medicines, For some people

    Some people take androgen hormone medicine, which can raise blood counts but does not repair the genetic defect.

  • Donor stem cell transplant

    A transplant from a related or unrelated donor can restore blood production, and cancer checks continue afterward.

    What a transplant involves

These are the kinds of treatment this page describes, not a plan. Which ones fit, in what order and whether they are combined differs from person to person.

When transplant specialists are usually consulted

NMDP and ASTCT guidance suggests a transplant consultation for Fanconi anemia when blood counts start to fall, transfusions become needed or serious infections occur. It also suggests one when high-risk cell changes, MDS or AML appear.

Read the guidance

What a transplant involves

What a transplant involvesTiming and details differ by person and transplant center.Simplified illustration.
  1. Step 1

    : Finding a donor

    Relatives are tested first to see whether their tissue type (HLA) matches. If none match, the team searches donor registries and cord blood banks.

  2. Step 2

    : Conditioning

    Chemotherapy, sometimes with radiation, prepares the body for the new cells.

  3. Step 3

    : Transplant day, Day 0

    The donor’s cells are given through a vein, like a transfusion.

  4. Step 4

    : Engraftment

    The new cells settle in the marrow and start making blood cells, usually within weeks.

  5. Step 5

    : Recovery

    The immune system rebuilds over months. The team watches for infection, graft-versus-host disease (donor immune cells attacking the body) and relapse.

A transplant, step by step

Daily life and the donor’s role

Living with the condition

Care may involve hematology, genetics and several organ specialists. Appointments can include growth and hormone assessment, oral and skin examination and monitoring of hearing, kidneys or other affected organs.

Families may need help coordinating these visits with school, work and daily life. A transplant adds preparation, hospital treatment and prolonged follow-up; its benefit is weighed alongside both early complications and late effects. People’s care needs and priorities differ.

The donor’s role

A suitable related or unrelated donor can provide the blood-forming cells for transplantation. A close HLA match is important, but a related donor must also be assessed for Fanconi anemia even if they feel well and have normal blood counts.

A registry search is a meaningful option when an appropriate family donor is unavailable. Donor cells treat the blood-forming system; they do not cure every effect of Fanconi anemia.

Where transplant cells come fromWhich source a team considers depends on the condition, the person and who is available.Simplified illustration.

Highlighted here: a relative, an unrelated volunteer and donated cord blood.

  • The person’s own cells

    Autologous transplant, no donor

    Collected from the person before treatment, then given back.

  • A relative

    Donor transplant (allogeneic)

    A brother or sister may be a full match. Parents and children can be half-matched donors.

  • An unrelated volunteer

    Donor transplant (allogeneic)

    Found through a donor registry.

  • Donated cord blood

    Donor transplant (allogeneic)

    Collected from a baby’s umbilical cord after birth and stored in a public bank.

Some patients rely on a volunteer donor they have never met. Joining your country’s registry could make you that person for someone.

Join the registry

Finding a donor and the outlook

How a donor is found

When a transplant from a donor is planned, the team usually tests brothers and sisters first. Each full sibling has about a one in four chance of being a full match.

Most patients do not have a matched relative. In the words of NMDP, the U.S. registry, “75% of patients don’t have a fully matched donor in their own family.” The team then searches registries of volunteer donors around the world and banks of donated cord blood. In some transplants, a half-matched parent, child or sibling can also be the donor.

What a match meansDoctors compare tissue-type markers called HLA. Each person has two copies of each HLA gene, one from each parent.Simplified illustration.
  • 8 of 8

    All eight markers match. Doctors call this a full match.

    8 of 8: the donor matches the patient at all eight markers, two each for HLA-A, HLA-B, HLA-C and HLA-DRB1.

  • 7 of 8

    One marker differs. Some transplants use a donor like this.

    7 of 8: the donor matches at seven of the eight markers. One HLA-C marker differs.

  • Half-matched

    One set, inherited together from one parent, matches. The rest may or may not.

    Half-matched: the donor matches the four markers the patient inherited from one parent. The other four may or may not match.

  • Matches
  • Differs
  • May or may not match
  • Top row: from one parent. Bottom row: from the other.
  • DR means HLA-DRB1

Doctors can look at up to 12 HLA markers, and usually aim to match 8 to 10 of them. This drawing shows the 8 that transplant guidelines count, and it reads each one as simply matching or not.

Matching depends on inherited tissue markers called HLA, so a patient is most likely to match someone who shares their ancestry. Every person who joins makes the search a little more likely to succeed, especially for patients from groups that are underrepresented on registries.

Looking ahead

Outlook for Fanconi anemia

In the Italian Fanconi Anemia Registry, about 9 in 10 people had developed a blood problem by age 20, often starting in childhood. What shapes the outlook most is whether marrow failure, MDS or AML, or a solid cancer develops, and when. The gene matters too. Children with the BRCA2 (FANCD1) form have a very high risk of leukemia and other cancers in early childhood. The FANCC and FANCG forms tend to cause marrow failure earlier and more often.

A donor transplant is the only cure for the blood problems. Results are best when the transplant happens before MDS or leukemia and before many transfusions, at a center experienced with Fanconi anemia. These centers use gentler, lower-dose treatment before transplant, usually built around a medicine called fludarabine. Survival is much lower when the transplant is for MDS or AML than for marrow failure alone.

The higher cancer risk remains after transplant, especially for head, neck and gynecologic cancers. Past chronic adds to that risk, so cancer screening continues for life. Decades ago, children with Fanconi anemia rarely reached adulthood. Today a growing number of adults live with it, and cancer is now the main cause of death in adults. Group numbers come from specific registries and eras, and they cannot predict how any one person will do.

About these numbers. Each one says which group of people it comes from, and the place and years where the source gives them. It describes what happened across that group, not what will happen to any one person. And a figure measured among people who had a transplant is not the same as the number of people who need one.

  • 22.5 yearsMedian survival (from birth)

    180 people with Fanconi anemia in the Italian Fanconi Anemia Registry, included 1994–2014, median follow-up 15.6 years, with and without transplant; published 2016

    Read the source: Median survival (from birth)
  • About 35%MDS or AML by age 40

    People with Fanconi anemia in the International Fanconi Anemia Registry, the U.S. National Cancer Institute cohort and the German Fanconi anemia registry (competing-risk analyses), as summarized by GeneReviews, updated January 2026

    Read the source: MDS or AML by age 40
  • 83% overall; 85% when transplanted for marrow failure vs 40% for MDS or AMLAlive 5 years after transplant

    813 children under 18 with Fanconi anemia in the EBMT transplant registry (mainly Europe), reported at a 2022 meeting and summarized in the EBMT Handbook, 2024; describes children who had a transplant, not everyone with the condition

    Read the source: Alive 5 years after transplant

Transplant figures describe children who had a transplant, not everyone with Fanconi anemia.

Common questions

Is Fanconi anemia inherited?

Yes. Fanconi anemia is a genetic condition. Most forms happen when both copies of a Fanconi-related gene carry a disease-causing change. There are also X-linked and rare dominant forms. Someone who carries one change linked to the recessive form usually does not have Fanconi anemia, but some of these genes can still raise cancer risk. A genetic counselor can explain what a result means for the family.

What are the signs of Fanconi anemia?

Signs vary from person to person. Most people develop problems with bone marrow function, and falling blood counts can cause anemia, bleeding and a higher risk of infection. Some have differences in growth, skin coloring, thumbs, kidneys or other organs, while others have few outward signs. Fanconi anemia also raises the risk of myelodysplastic neoplasms, leukemia and certain solid tumors.

Does a bone marrow transplant cure Fanconi anemia?

Not completely. A donor transplant can restore blood production and treat severe marrow failure or some blood cancers. But it does not correct the genetic condition throughout the body. Physical differences, hormone problems and the higher risk of solid tumors remain, so cancer checks continue for life. Transplant treatment is also adjusted, because Fanconi cells are unusually sensitive to DNA-damaging treatment.

Can a brother or sister be the donor?

Possibly, if they are a close tissue (HLA) match. Because Fanconi anemia runs in families, a brother or sister must also be checked for it, even if they feel well and have normal blood counts. When no suitable family donor is available, a registry search for an unrelated volunteer is an established option. Bone marrow is generally the preferred source of cells when possible.

Is Fanconi anemia the same as aplastic anemia?

Not exactly. Aplastic anemia means the bone marrow makes too few blood cells. Fanconi anemia is one inherited cause of it: most people with Fanconi anemia develop marrow failure, and the condition can also affect growth, other organs and cancer risk. Most aplastic anemia is not inherited. It is usually caused by the immune system damaging the marrow's stem cells.

What is the life expectancy for someone with Fanconi anemia?

There is no single number, and group figures cannot predict one person's future. In a large Italian registry, the main causes of death were cancer, complications of the blood problems and transplant complications. Outlook depends on the gene involved, when blood problems or cancers appear, and how transplant goes. Cancer screening continues for life. The outlook section on this page gives the figures, with the groups they describe.

Why the details matter

A transplant does not change physical differences present from birth, and it does not remove the higher risk of solid cancers. Relatives who might donate are first checked for Fanconi anemia themselves.

For your next appointment

Fanconi anemia (FA)

From the Jada Bascom Foundation disease library, jadabascomfoundation.org. Printed .

Questions to bring to your care team

  • Which Fanconi gene is involved, and does that type (for example BRCA2/FANCD1, FANCC or FANCG) change how closely you watch for leukemia or other cancers?
  • Have all brothers and sisters had a chromosome breakage test or genetic test for Fanconi anemia?
  • What blood counts or marrow findings would lead you to recommend transplant, and how many Fanconi anemia transplants has this center done?
  • After transplant, what is the plan for head and neck, skin and gynecologic cancer screening, and for HPV vaccination?
  • What is the exact name of the diagnosis or subtype, and what does it mean for treatment?
  • What is the goal of each treatment you are suggesting?
  • Should brothers and sisters have HLA typing, and when does a donor search start?
  • What happens if a fully matched donor is not found?
  • Where can our family find support during treatment?

A one-page list to take to the next appointment, with room for notes.

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Sources and further reading

  1. Fanconi Anemia
    GeneReviews, University of Washington / NCBI Bookshelf, Last update 2026-01-15; accessed 2026-09-05
  2. Fanconi anemia
    MedlinePlus Genetics, US National Library of Medicine, Accessed 2026-09-05
  3. Fanconi Anemia and Other Hereditary Bone Marrow Failure Syndromes
    EBMT Handbook, 2024-04-11
  4. Join the registry
    NMDP, Accessed 2026-09-24
  5. On modeling human leukocyte antigen-identical sibling match probability for allogeneic hematopoietic cell transplantation
    Biology of Blood and Marrow Transplantation, March 2016
  6. Stem Cell and Bone Marrow Transplants for Cancer
    NCI, Accessed 2026-09-24
  7. Allogeneic Hematopoietic Cell Donor Selection: Contemporary Guidelines from the NMDP/CIBMTR
    NMDP / CIBMTR, Transplantation and Cellular Therapy, 2025
  8. What is HLA? HLA basics, typing and matching
    NMDP, Accessed 2026-09-26
  9. Matching with a patient
    NMDP, Accessed 2026-09-26
  10. BRCA1-, BRCA2-, and PALB2-related Fanconi anemia: Scope to expand disease phenotypic features and predict breast cancer risk in heterozygotes
    American Journal of Human Genetics (Johnatty SE, et al.), 2025; accessed 2026-09-24
  11. Clinical Care Guidelines, Chapter 2: Diagnosis of Fanconi Anemia: Testing and Genetic Counseling
    Fanconi Cancer Foundation, Accessed 2026-09-24
  12. The 5th edition of the World Health Organization Classification of Haematolymphoid Tumours: Myeloid and Histiocytic/Dendritic Neoplasms
    Leukemia (Khoury JD, et al.), 2022; accessed 2026-09-24
  13. Indications for haematopoietic cell transplantation and CAR-T for haematological diseases, solid tumours and immune disorders: 2025 EBMT practice recommendations
    EBMT / Bone Marrow Transplantation (Greco R, et al.), 2025; accessed 2026-09-24
  14. Brief Guide to Clinical Care for Patients with Fanconi Anemia
    Fanconi Cancer Foundation, Accessed 2026-09-24
  15. Aplastic Anemia
    NHLBI, NIH, Last updated 2022-03-24; accessed 2026-09-24
  16. Other marrow failure diseases: HCT consultation timing guidelines and outcomes (NMDP/ASTCT)
    NMDP, Accessed 2026-09-26
  17. Twenty years of the Italian Fanconi Anemia Registry: where we stand and what remains to be learned
    Haematologica (Risitano AM, et al.), 2016-03; accessed 2026-09-26
  18. What is FA?
    Fanconi Cancer Foundation, Accessed 2026-09-26
  19. Androgen therapy in Fanconi anemia: A retrospective analysis of 30 years in Germany
    Pediatric Hematology and Oncology (Paustian L, et al.), 2016

This information explains a condition and its treatments. It cannot diagnose an illness or recommend treatment for an individual. Your care team can explain how the evidence applies to you. Written and source-checked by the Jada Bascom Foundation. Each page lists the published sources it draws on.

Ways to help

Someone may be waiting for a match.

Some people with Fanconi anemia (FA) are treated with a transplant from a donor. When no relative matches, that donor is often a stranger who joined a registry.

Join the registry

JBF points you to the official registry that serves your country. It explains who can join and what donation involves.

Help someone you love find a donor

If someone you love needs a donor, our family guide explains practical ways to help. A registration drive can add many potential donors at once, for them and for others.

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Gifts to the Jada Bascom Foundation support donor-awareness education like this page, community outreach, drive planning and referrals to official registries.

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